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Add mising --log-dir argument to wrapper script

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This commit is contained in:
Patrick Jentsch
2021-04-12 09:53:59 +02:00
parent e2da0fb839
commit a798457c43
1 changed files with 11 additions and 16 deletions
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27
wrapper/ocr
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@@ -1,8 +1,6 @@
#!/usr/bin/env python3
# coding=utf-8
"""A wrapper to execute the OCR pipeline in a Docker container."""
from argparse import ArgumentParser
import os
import subprocess
@@ -10,8 +8,8 @@ import sys
CONTAINER_IMAGE = 'gitlab.ub.uni-bielefeld.de:4567/sfb1288inf/ocr:1.0.0'
CONTAINER_INPUT_DIR = '/input'
CONTAINER_LOG_DIR = '/logs'
CONTAINER_OUTPUT_DIR = '/output'
CONTAINER_LOG_DIR = '/logs'
UID = str(os.getuid())
GID = str(os.getgid())
@@ -22,21 +20,18 @@ parser.add_argument('--log-dir')
args, remaining_args = parser.parse_known_args()
cmd = ['docker', 'run', '--rm', '-it', '-u', '{}:{}'.format(UID, GID)]
if args.log_dir is not None:
cmd += ['-v', '{}:{}'.format(os.path.abspath(args.log_dir),
CONTAINER_LOG_DIR)]
remaining_args.insert(0, CONTAINER_LOG_DIR)
remaining_args.insert(0, '--log-dir')
if args.input_dir is not None:
cmd += ['-v', '{}:{}'.format(os.path.abspath(args.input_dir),
CONTAINER_INPUT_DIR)]
remaining_args.insert(0, CONTAINER_INPUT_DIR)
remaining_args.insert(0, '-i')
mapping = os.path.abspath(args.input_dir) + ':' + CONTAINER_INPUT_DIR
cmd += ['-v', mapping]
remaining_args += ['-i', CONTAINER_INPUT_DIR]
if args.output_dir is not None:
cmd += ['-v', '{}:{}'.format(os.path.abspath(args.output_dir),
CONTAINER_OUTPUT_DIR)]
remaining_args.insert(0, CONTAINER_OUTPUT_DIR)
remaining_args.insert(0, '-o')
mapping = os.path.abspath(args.output_dir) + ':' + CONTAINER_OUTPUT_DIR
cmd += ['-v', mapping]
remaining_args += ['-o', CONTAINER_OUTPUT_DIR]
if args.log_dir is not None:
mapping = os.path.abspath(args.log_dir) + ':' + CONTAINER_LOG_DIR
cmd += ['-v', mapping]
remaining_args += ['--log-dir', CONTAINER_LOG_DIR]
cmd.append(CONTAINER_IMAGE)
cmd += remaining_args