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Fix zip creation
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6
nlp
6
nlp
@ -99,12 +99,16 @@ class NLPPipeline(WorkflowRunner):
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'''
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zip_jobs = []
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if self.zip is not None:
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# Remove .zip file extension if provided
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if self.zip.endswith('.zip'):
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self.zip = self.zip[:-4]
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self.zip = self.zip if self.zip else 'output'
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cmd = 'cd "{}"'.format(self.output_dir)
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cmd += ' && '
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cmd += 'zip'
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cmd += ' -m'
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cmd += ' -r'
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cmd += ' "{}_-_vrt" .'.format(self.zip)
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cmd += ' "{}".zip .'.format(self.zip)
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cmd += ' -x "pyflow.data*"'
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cmd += ' -i "*.vrt"'
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cmd += ' && '
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