from app import db, docker_client, scheduler from app.models import Corpus, CorpusStatus from flask import current_app import docker import os import shutil def job(): with scheduler.app.app_context(): _handle_corpora() def _handle_corpora(): corpora = Corpus.query.all() for corpus in [x for x in corpora if x.status == CorpusStatus.SUBMITTED]: _create_build_corpus_service(corpus) for corpus in [x for x in corpora if x.status in [CorpusStatus.QUEUED, CorpusStatus.BUILDING]]: _checkout_build_corpus_service(corpus) for corpus in [x for x in corpora if x.status == CorpusStatus.BUILT and x.num_analysis_sessions > 0]: corpus.status = CorpusStatus.STARTING_ANALYSIS_SESSION for corpus in [x for x in corpora if x.status == CorpusStatus.RUNNING_ANALYSIS_SESSION and x.num_analysis_sessions == 0]: corpus.status = CorpusStatus.CANCELING_ANALYSIS_SESSION for corpus in [x for x in corpora if x.status == CorpusStatus.RUNNING_ANALYSIS_SESSION]: _checkout_analysing_corpus_container(corpus) for corpus in [x for x in corpora if x.status == CorpusStatus.STARTING_ANALYSIS_SESSION]: _create_cqpserver_container(corpus) for corpus in [x for x in corpora if x.status == CorpusStatus.CANCELING_ANALYSIS_SESSION]: _remove_cqpserver_container(corpus) db.session.commit() def _create_build_corpus_service(corpus): ''' # Docker service settings # ''' ''' ## Command ## ''' command = ['bash', '-c'] command.append( f'mkdir /corpora/data/nopaque-{corpus.hashid.lower()}' ' && ' 'cwb-encode' ' -c utf8' f' -d /corpora/data/nopaque-{corpus.hashid.lower()}' ' -f /root/files/corpus.vrt' f' -R /usr/local/share/cwb/registry/nopaque-{corpus.hashid.lower()}' ' -P pos -P lemma -P simple_pos' ' -S ent:0+type -S s:0' ' -S text:0+address+author+booktitle+chapter+editor+institution+journal+pages+publisher+publishing_year+school+title' ' -xsB -9' ' && ' f'cwb-make -V NOPAQUE-{corpus.hashid.upper()}' ) ''' ## Constraints ## ''' constraints = ['node.role==worker'] ''' ## Image ## ''' image = f'{current_app.config["NOPAQUE_DOCKER_IMAGE_PREFIX"]}cwb:r1879' ''' ## Labels ## ''' labels = { 'origin': current_app.config['SERVER_NAME'], 'type': 'corpus.build', 'corpus_id': str(corpus.id) } ''' ## Mounts ## ''' mounts = [] ''' ### Data mount ### ''' data_mount_source = os.path.join(corpus.path, 'cwb', 'data') data_mount_target = '/corpora/data' data_mount = f'{data_mount_source}:{data_mount_target}:rw' # Make sure that their is no data in the data directory shutil.rmtree(data_mount_source, ignore_errors=True) os.makedirs(data_mount_source) mounts.append(data_mount) ''' ### File mount ### ''' file_mount_source = os.path.join(corpus.path, 'cwb', 'corpus.vrt') file_mount_target = '/root/files/corpus.vrt' file_mount = f'{file_mount_source}:{file_mount_target}:ro' mounts.append(file_mount) ''' ### Registry mount ### ''' registry_mount_source = os.path.join(corpus.path, 'cwb', 'registry') registry_mount_target = '/usr/local/share/cwb/registry' registry_mount = f'{registry_mount_source}:{registry_mount_target}:rw' # Make sure that their is no data in the registry directory shutil.rmtree(registry_mount_source, ignore_errors=True) os.makedirs(registry_mount_source) mounts.append(registry_mount) ''' ## Name ## ''' name = f'build-corpus_{corpus.id}' ''' ## Restart policy ## ''' restart_policy = docker.types.RestartPolicy() try: docker_client.services.create( image, command=command, constraints=constraints, labels=labels, mounts=mounts, name=name, restart_policy=restart_policy, user='0:0' ) except docker.errors.DockerException as e: current_app.logger.error(f'Create service "{name}" failed: {e}') return corpus.status = CorpusStatus.QUEUED def _checkout_build_corpus_service(corpus): service_name = f'build-corpus_{corpus.id}' try: service = docker_client.services.get(service_name) except docker.errors.NotFound as e: current_app.logger.error(f'Get service "{service_name}" failed: {e}') corpus.status = CorpusStatus.FAILED return except docker.errors.DockerException as e: current_app.logger.error(f'Get service "{service_name}" failed: {e}') service_tasks = service.tasks() if not service_tasks: return task_state = service_tasks[0].get('Status').get('State') if corpus.status == CorpusStatus.QUEUED and task_state != 'pending': corpus.status = CorpusStatus.BUILDING return elif corpus.status == CorpusStatus.BUILDING and task_state == 'complete': corpus.status = CorpusStatus.BUILT elif corpus.status == CorpusStatus.BUILDING and task_state == 'failed': corpus.status = CorpusStatus.FAILED else: return try: service.remove() except docker.errors.DockerException as e: current_app.logger.error(f'Remove service "{service_name}" failed: {e}') def _create_cqpserver_container(corpus): ''' # Docker container settings # ''' ''' ## Command ## ''' command = [] command.append( 'echo "host *;" > cqpserver.init' ' && ' 'echo "user anonymous \\"\\";" >> cqpserver.init' ' && ' 'cqpserver -I cqpserver.init' ) ''' ## Detach ## ''' detach = True ''' ## Entrypoint ## ''' entrypoint = ['bash', '-c'] ''' ## Image ## ''' image = f'{current_app.config["NOPAQUE_DOCKER_IMAGE_PREFIX"]}cwb:r1879' ''' ## Name ## ''' name = f'cqpserver_{corpus.id}' ''' ## Network ## ''' network = f'{current_app.config["NOPAQUE_DOCKER_NETWORK_NAME"]}' ''' ## Volumes ## ''' volumes = [] ''' ### Corpus data volume ### ''' data_volume_source = os.path.join(corpus.path, 'cwb', 'data') data_volume_target = '/corpora/data' # data_volume_source = os.path.join(corpus.path, 'cwb', 'data', f'nopaque_{corpus.id}') # data_volume_target = f'/corpora/data/nopaque_{corpus.hashid.lower()}' data_volume = f'{data_volume_source}:{data_volume_target}:rw' volumes.append(data_volume) ''' ### Corpus registry volume ### ''' registry_volume_source = os.path.join(corpus.path, 'cwb', 'registry') registry_volume_target = '/usr/local/share/cwb/registry' # registry_volume_source = os.path.join(corpus.path, 'cwb', 'registry', f'nopaque_{corpus.id}') # registry_volume_target = f'/usr/local/share/cwb/registry/nopaque_{corpus.hashid.lower()}' registry_volume = f'{registry_volume_source}:{registry_volume_target}:rw' volumes.append(registry_volume) # Check if a cqpserver container already exists. If this is the case, # remove it and create a new one try: container = docker_client.containers.get(name) except docker.errors.NotFound: pass except docker.errors.DockerException as e: current_app.logger.error(f'Get container "{name}" failed: {e}') return else: try: container.remove(force=True) except docker.errors.DockerException as e: current_app.logger.error(f'Remove container "{name}" failed: {e}') return try: docker_client.containers.run( image, command=command, detach=detach, entrypoint=entrypoint, name=name, network=network, user='0:0', volumes=volumes ) except docker.errors.ImageNotFound as e: current_app.logger.error( f'Run container "{name}" failed ' f'due to "docker.errors.ImageNotFound" error: {e}' ) corpus.status = CorpusStatus.FAILED return except docker.errors.DockerException as e: current_app.logger.error(f'Run container "{name}" failed: {e}') return corpus.status = CorpusStatus.RUNNING_ANALYSIS_SESSION def _checkout_analysing_corpus_container(corpus): container_name = f'cqpserver_{corpus.id}' try: docker_client.containers.get(container_name) except docker.errors.NotFound as e: current_app.logger.error(f'Get container "{container_name}" failed: {e}') corpus.num_analysis_sessions = 0 corpus.status = CorpusStatus.BUILT except docker.errors.DockerException as e: current_app.logger.error(f'Get container "{container_name}" failed: {e}') def _remove_cqpserver_container(corpus): container_name = f'cqpserver_{corpus.id}' try: container = docker_client.containers.get(container_name) except docker.errors.NotFound: corpus.status = CorpusStatus.BUILT return except docker.errors.DockerException as e: current_app.logger.error(f'Get container "{container_name}" failed: {e}') return try: container.remove(force=True) except docker.errors.DockerException as e: current_app.logger.error(f'Remove container "{container_name}" failed: {e}')