mirror of
https://gitlab.ub.uni-bielefeld.de/sfb1288inf/nopaque.git
synced 2024-11-15 01:05:42 +00:00
Add result json import validation
This commit is contained in:
Stephan Porada
parent
f86f3f4fd5
commit
d4eb9e7663
@ -11,6 +11,7 @@ from flask_login import current_user, login_required
|
||||
import json
|
||||
import os
|
||||
from .. import logger
|
||||
from jsonschema import validate
|
||||
|
||||
|
||||
@results.route('/import_results', methods=['GET', 'POST'])
|
||||
@ -32,6 +33,7 @@ def import_results():
|
||||
if not (result.creator == current_user
|
||||
or current_user.is_administrator()):
|
||||
abort(403)
|
||||
# create paths to save the uploaded json file
|
||||
dir = os.path.join(str(result.user_id),
|
||||
'results',
|
||||
'corpus_analysis_results',
|
||||
@ -40,23 +42,43 @@ def import_results():
|
||||
abs_file_path = os.path.join(abs_dir,
|
||||
import_results_form.file.data.filename)
|
||||
os.makedirs(abs_dir)
|
||||
# save the json file
|
||||
import_results_form.file.data.save(abs_file_path)
|
||||
# Saves all needed metadata entries in one json field
|
||||
with open(abs_file_path, 'r') as f:
|
||||
corpus_metadata = json.load(f)
|
||||
del corpus_metadata['matches']
|
||||
del corpus_metadata['cpos_lookup']
|
||||
result_file = ResultFile(
|
||||
result_id=result.id,
|
||||
dir=dir,
|
||||
filename=import_results_form.file.data.filename)
|
||||
result.corpus_metadata = corpus_metadata
|
||||
# Create ResultFile db entry
|
||||
result_file = ResultFile(result_id=result.id,
|
||||
dir=dir,
|
||||
filename=import_results_form.file.data.filename) # noqa
|
||||
db.session.add(result_file)
|
||||
db.session.commit()
|
||||
flash('Result file added!', 'result')
|
||||
return make_response(
|
||||
{'redirect_url': url_for('results.results_overview')},
|
||||
201)
|
||||
# reads uploaded json file
|
||||
with open(abs_file_path, 'r') as f:
|
||||
corpus_metadata = json.load(f)
|
||||
try:
|
||||
# open json schema to validate against it
|
||||
with open('app/static/json_schema/nopaque_cqi_py_results_schema.json', # noqa
|
||||
'r') as s:
|
||||
schema = json.load(s)
|
||||
# validate if imported json is actually a json result file
|
||||
validate(instance=corpus_metadata, schema=schema)
|
||||
# if validated continue
|
||||
# delete matches and cpos_lookup from read json file
|
||||
del corpus_metadata['matches']
|
||||
del corpus_metadata['cpos_lookup']
|
||||
# save metadate directly as json into one field
|
||||
result.corpus_metadata = corpus_metadata
|
||||
flash('Result file added!', 'result')
|
||||
db.session.commit()
|
||||
return make_response(
|
||||
{'redirect_url': url_for('results.results_overview')},
|
||||
201)
|
||||
except Exception as e:
|
||||
# this runs if validation fails
|
||||
flash('Uploaded file was not a valid result JSON!', 'result')
|
||||
# deletes before created Result and ResultFile db entries
|
||||
tasks.delete_result(result.id)
|
||||
return make_response(
|
||||
{'redirect_url': url_for('results.import_results')},
|
||||
201)
|
||||
return render_template('results/import_results.html.j2',
|
||||
import_results_form=import_results_form,
|
||||
title='Add corpus file')
|
||||
@ -70,7 +92,6 @@ def results_overview():
|
||||
'''
|
||||
# get all results of current user
|
||||
results = User.query.get(current_user.id).results
|
||||
logger.warning(results)
|
||||
|
||||
def __p_time(time_str):
|
||||
# helper to convert the datetime into a nice readable string
|
||||
|
||||
322
web/app/static/json_schema/nopaque_cqi_py_results_schema.json
Normal file
322
web/app/static/json_schema/nopaque_cqi_py_results_schema.json
Normal file
@ -0,0 +1,322 @@
|
||||
{
|
||||
"$schema": "http://json-schema.org/draft-06/schema#",
|
||||
"$ref": "#/definitions/NopaqueCQIPYResults",
|
||||
"definitions": {
|
||||
"NopaqueCQIPYResults": {
|
||||
"type": "object",
|
||||
"additionalProperties": false,
|
||||
"properties": {
|
||||
"matches": {
|
||||
"type": "array",
|
||||
"items": {
|
||||
"$ref": "#/definitions/Match"
|
||||
}
|
||||
},
|
||||
"cpos_lookup": {
|
||||
"type": "object",
|
||||
"additionalProperties": {
|
||||
"$ref": "#/definitions/CposLookup"
|
||||
}
|
||||
},
|
||||
"text_lookup": {
|
||||
"type": "object",
|
||||
"additionalProperties": {
|
||||
"$ref": "#/definitions/CorpusAllText"
|
||||
}
|
||||
},
|
||||
"match_count": {
|
||||
"type": "integer"
|
||||
},
|
||||
"corpus_type": {
|
||||
"type": "string"
|
||||
},
|
||||
"query": {
|
||||
"type": "string"
|
||||
},
|
||||
"corpus_name": {
|
||||
"type": "string"
|
||||
},
|
||||
"corpus_description": {
|
||||
"type": "string"
|
||||
},
|
||||
"corpus_creation_date": {
|
||||
"type": "string",
|
||||
"format": "date-time"
|
||||
},
|
||||
"corpus_last_edited_date": {
|
||||
"type": "string",
|
||||
"format": "date-time"
|
||||
},
|
||||
"corpus_properties": {
|
||||
"type": "array",
|
||||
"items": {}
|
||||
},
|
||||
"corpus_size_tokens": {
|
||||
"type": "integer"
|
||||
},
|
||||
"corpus_all_texts": {
|
||||
"type": "object",
|
||||
"additionalProperties": {
|
||||
"$ref": "#/definitions/CorpusAllText"
|
||||
}
|
||||
},
|
||||
"corpus_analysis_date": {
|
||||
"type": "string",
|
||||
"format": "date-time"
|
||||
},
|
||||
"corpus_cqi_py_protocol_version": {
|
||||
"type": "string"
|
||||
},
|
||||
"corpus_cqi_py_package_version": {
|
||||
"type": "string"
|
||||
},
|
||||
"corpus_cqpserver_version": {
|
||||
"type": "string"
|
||||
},
|
||||
"cpos_ranges": {
|
||||
"type": "boolean"
|
||||
}
|
||||
},
|
||||
"required": [
|
||||
"corpus_all_texts",
|
||||
"corpus_analysis_date",
|
||||
"corpus_cqi_py_package_version",
|
||||
"corpus_cqi_py_protocol_version",
|
||||
"corpus_cqpserver_version",
|
||||
"corpus_creation_date",
|
||||
"corpus_description",
|
||||
"corpus_last_edited_date",
|
||||
"corpus_name",
|
||||
"corpus_properties",
|
||||
"corpus_size_tokens",
|
||||
"corpus_type",
|
||||
"cpos_lookup",
|
||||
"cpos_ranges",
|
||||
"match_count",
|
||||
"matches",
|
||||
"query",
|
||||
"text_lookup"
|
||||
],
|
||||
"title": "NopaqueCQIPYResults"
|
||||
},
|
||||
"CorpusAllText": {
|
||||
"type": "object",
|
||||
"additionalProperties": false,
|
||||
"properties": {
|
||||
"address": {
|
||||
"type": "string"
|
||||
},
|
||||
"author": {
|
||||
"type": "string"
|
||||
},
|
||||
"booktitle": {
|
||||
"type": "string"
|
||||
},
|
||||
"chapter": {
|
||||
"type": "string"
|
||||
},
|
||||
"editor": {
|
||||
"type": "string"
|
||||
},
|
||||
"institution": {
|
||||
"type": "string"
|
||||
},
|
||||
"journal": {
|
||||
"type": "string"
|
||||
},
|
||||
"pages": {
|
||||
"type": "string"
|
||||
},
|
||||
"publisher": {
|
||||
"type": "string"
|
||||
},
|
||||
"publishing_year": {
|
||||
"type": "string",
|
||||
"format": "integer"
|
||||
},
|
||||
"school": {
|
||||
"type": "string"
|
||||
},
|
||||
"title": {
|
||||
"type": "string"
|
||||
}
|
||||
},
|
||||
"required": [
|
||||
"address",
|
||||
"author",
|
||||
"booktitle",
|
||||
"chapter",
|
||||
"editor",
|
||||
"institution",
|
||||
"journal",
|
||||
"pages",
|
||||
"publisher",
|
||||
"publishing_year",
|
||||
"school",
|
||||
"title"
|
||||
],
|
||||
"title": "CorpusAllText"
|
||||
},
|
||||
"CposLookup": {
|
||||
"type": "object",
|
||||
"additionalProperties": false,
|
||||
"properties": {
|
||||
"word": {
|
||||
"type": "string"
|
||||
},
|
||||
"lemma": {
|
||||
"type": "string"
|
||||
},
|
||||
"simple_pos": {
|
||||
"$ref": "#/definitions/SimplePos"
|
||||
},
|
||||
"pos": {
|
||||
"type": "string"
|
||||
},
|
||||
"ner": {
|
||||
"$ref": "#/definitions/Ner"
|
||||
},
|
||||
"text": {
|
||||
"type": "integer"
|
||||
},
|
||||
"s": {
|
||||
"type": "integer"
|
||||
}
|
||||
},
|
||||
"required": [
|
||||
"lemma",
|
||||
"ner",
|
||||
"pos",
|
||||
"s",
|
||||
"simple_pos",
|
||||
"text",
|
||||
"word"
|
||||
],
|
||||
"title": "CposLookup"
|
||||
},
|
||||
"Match": {
|
||||
"type": "object",
|
||||
"additionalProperties": false,
|
||||
"properties": {
|
||||
"lc": {
|
||||
"type": "array",
|
||||
"items": {
|
||||
"type": "integer"
|
||||
}
|
||||
},
|
||||
"c": {
|
||||
"type": "array",
|
||||
"items": {
|
||||
"type": "integer"
|
||||
}
|
||||
},
|
||||
"rc": {
|
||||
"type": "array",
|
||||
"items": {
|
||||
"type": "integer"
|
||||
}
|
||||
}
|
||||
},
|
||||
"required": [
|
||||
"c",
|
||||
"lc",
|
||||
"rc"
|
||||
],
|
||||
"title": "Match"
|
||||
},
|
||||
"Ner": {
|
||||
"type": "string",
|
||||
"enum": [
|
||||
"NULL",
|
||||
"LOC",
|
||||
"MISC",
|
||||
"ORG",
|
||||
"PER",
|
||||
"EVENT",
|
||||
"GPE",
|
||||
"LOC",
|
||||
"ORG",
|
||||
"PERSON",
|
||||
"PRODUCT",
|
||||
"CARDINAL",
|
||||
"DATE",
|
||||
"EVENT",
|
||||
"FAC",
|
||||
"GPE",
|
||||
"LANGUAGE",
|
||||
"LAW",
|
||||
"LOC",
|
||||
"MONEY",
|
||||
"NORP",
|
||||
"ORDINAL",
|
||||
"ORG",
|
||||
"PERCENT",
|
||||
"PERSON",
|
||||
"PRODUCT",
|
||||
"QUANTITY",
|
||||
"TIME",
|
||||
"WORK_OF_ART",
|
||||
"LOC",
|
||||
"MISC",
|
||||
"ORG",
|
||||
"PER",
|
||||
"LOC",
|
||||
"MISC",
|
||||
"ORG",
|
||||
"PER",
|
||||
"LOC",
|
||||
"MISC",
|
||||
"ORG",
|
||||
"PER",
|
||||
"CARDINAL",
|
||||
"DATE",
|
||||
"EVENT",
|
||||
"FAC",
|
||||
"GPE",
|
||||
"LANGUAGE",
|
||||
"LAW",
|
||||
"LOC",
|
||||
"MONEY",
|
||||
"NORP",
|
||||
"ORDINAL",
|
||||
"ORG",
|
||||
"PERCENT",
|
||||
"PERSON",
|
||||
"PRODUCT",
|
||||
"QUANTITY",
|
||||
"TIME",
|
||||
"WORK_OF_ART",
|
||||
"LOC",
|
||||
"MISC",
|
||||
"ORG",
|
||||
"PER"
|
||||
],
|
||||
"title": "Ner"
|
||||
},
|
||||
"SimplePos": {
|
||||
"type": "string",
|
||||
"enum": [
|
||||
"ADJ",
|
||||
"ADP",
|
||||
"ADV",
|
||||
"AUX",
|
||||
"CONJ",
|
||||
"CCONJ",
|
||||
"DET",
|
||||
"INTJ",
|
||||
"NOUN",
|
||||
"NUM",
|
||||
"PART",
|
||||
"PRON",
|
||||
"PROPN",
|
||||
"PUNCT",
|
||||
"SCONJ",
|
||||
"SYM",
|
||||
"VERB",
|
||||
"X",
|
||||
"SPACE"
|
||||
],
|
||||
"title": "SimplePos"
|
||||
}
|
||||
}
|
||||
}
|
||||
@ -33,7 +33,7 @@
|
||||
<tr class="show-if-only-child">
|
||||
<td colspan="5">
|
||||
<span class="card-title"><i class="material-icons left">folder</i>Nothing here...</span>
|
||||
<p>No results yet improted.</p>
|
||||
<p>No results yet imported.</p>
|
||||
</td>
|
||||
</tr>
|
||||
</tbody>
|
||||
|
||||
@ -12,3 +12,4 @@ Flask-WTF
|
||||
jsonpatch
|
||||
psycopg2
|
||||
redis
|
||||
jsonschema
|
||||
|
||||
Loading…
Reference in New Issue
Block a user