Add Docker Swarm interface.

This commit is contained in:
Patrick Jentsch 2019-07-17 13:34:20 +02:00
parent 735802d88e
commit 7db27020c7
6 changed files with 155 additions and 4 deletions

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@ -3,6 +3,7 @@ from flask import Flask
from flask_login import LoginManager from flask_login import LoginManager
from flask_mail import Mail from flask_mail import Mail
from flask_sqlalchemy import SQLAlchemy from flask_sqlalchemy import SQLAlchemy
from .swarm import Swarm
db = SQLAlchemy() db = SQLAlchemy()
@ -11,6 +12,7 @@ login_manager = LoginManager()
login_manager.login_view = 'auth.login' login_manager.login_view = 'auth.login'
mail = Mail() mail = Mail()
swarm = Swarm()
def create_app(config_name): def create_app(config_name):
@ -21,6 +23,8 @@ def create_app(config_name):
db.init_app(app) db.init_app(app)
login_manager.init_app(app) login_manager.init_app(app)
mail.init_app(app) mail.init_app(app)
if not hasattr(app, 'extensions'):
app.extensions = {}
from .auth import auth as auth_blueprint from .auth import auth as auth_blueprint
app.register_blueprint(auth_blueprint, url_prefix='/auth') app.register_blueprint(auth_blueprint, url_prefix='/auth')

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@ -0,0 +1,6 @@
from flask_wtf import FlaskForm
from wtforms import SubmitField
class SwarmForm(FlaskForm):
submit = SubmitField('Submit')

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@ -1,9 +1,12 @@
from flask import render_template from flask import redirect, render_template, url_for
from ..models import User from ..models import User
from ..tables import AdminUserTable, AdminUserItem from ..tables import AdminUserTable, AdminUserItem
from . import main from . import main
from ..decorators import admin_required from ..decorators import admin_required
from flask_login import login_required from flask_login import current_user, login_required
from .forms import SwarmForm
from ..import swarm
from threading import Thread
@main.route('/') @main.route('/')
@ -16,7 +19,7 @@ def about():
return render_template('main/about.html.j2', title='About') return render_template('main/about.html.j2', title='About')
@main.route('/admin') @main.route('/admin', methods=['GET', 'POST'])
@login_required @login_required
@admin_required @admin_required
def for_admins_only(): def for_admins_only():
@ -26,5 +29,32 @@ def for_admins_only():
users = User.query.order_by(User.username).all() users = User.query.order_by(User.username).all()
items = [AdminUserItem(u.username, u.email, u.role_id, u.confirmed) for u in users] items = [AdminUserItem(u.username, u.email, u.role_id, u.confirmed) for u in users]
table = AdminUserTable(items) table = AdminUserTable(items)
swarm_form = SwarmForm()
if swarm_form.validate_on_submit():
'''
' TODO: Implement a Job class. For now a dictionary representation is
' enough.
'''
job = {
'creator': current_user.id,
'id': '5fd40cb0cadef3ab5676c4968fc3d748',
'requested_cpus': 2,
'requested_memory': 2048,
'service': 'ocr',
'service_args': {
'lang': 'eng'
},
'status': 'queued'
}
'''
' TODO: Let the scheduler run this job in the background. Using self
' created threads is just for testing purpose as there is no
' scheduler available.
'''
thread = Thread(target=swarm.run, args=(job,))
thread.start()
return redirect(url_for('main.for_admins_only'))
return render_template('main/admin.html.j2', title='Administration tools', return render_template('main/admin.html.j2', title='Administration tools',
table=table.__html__()) swarm_form=swarm_form, table=table.__html__())

98
app/swarm.py Normal file
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@ -0,0 +1,98 @@
import docker
import subprocess
class Swarm:
def __init__(self):
self.docker = docker.from_env()
self.checkout()
def checkout(self):
cpus = 0
memory = 0
for node in self.docker.nodes.list(filters={'role': 'worker'}):
if node.attrs.get('Status').get('State') == 'ready':
cpus += 0 or node.attrs \
.get('Description') \
.get('Resources') \
.get('NanoCPUs')
memory += 0 or node.attrs \
.get('Description') \
.get('Resources') \
.get('MemoryBytes')
'''
' For whatever reason the Python Docker SDK provides a CPU count in
' nano (10^-6), whilst this is not that handy, it gets converted.
'''
cpus *= 10 ** -9
'''
' For a more natural handling the memory information
' gets converted from bytes to megabytes.
'''
memory *= 10 ** -6
self.cpus = int(cpus)
self.memory = int(memory)
self.available_cpus = self.cpus
self.available_memory = self.memory
def run(self, job):
if self.available_cpus < job['requested_cpus'] or \
self.available_memory < job['requested_memory']:
print('Not enough ressources available.')
'''
' TODO: At this point the scheduler thinks that the job gets
' processed, which apparently is not the case. So the job
' needs to get rescheduled and gain a new chance to get
' processed (next).
'
' Note: Maybe it is a good idea to create a method that checks if
' enough ressources are available before the run method gets
' executed. This would replace the need of the TODO mentioned
' above.
'''
return
job['status'] = 'running'
# TODO: Push job changes to the database
self.available_cpus -= job['requested_cpus']
self.available_memory -= job['requested_memory']
container_command = 'ocr' \
+ ' -i /input/{}'.format(job['id']) \
+ ' -l {}'.format(job['service_args']['lang']) \
+ ' -o /output' \
+ ' --keep-intermediates' \
+ ' --nCores {}'.format(job['requested_cpus'])
container_image = 'gitlab.ub.uni-bielefeld.de:4567/sfb1288inf/ocr'
container_mount = '/media/sf_files/=/input/'
'''
' Swarm mode is intendet to run containers which are meant to serve a
' non terminating service like a webserver. In order to process the
' occuring jobs it is necessary to use one-shot (terminating)
' containers. These one-shot containers are spawned with a programm
' called JaaS¹ (Jobs as a Service), which is described in Alex Ellis'
' short article "One-shot containers on Docker Swarm"².
'
' ¹ https://github.com/alexellis/jaas
' ² https://blog.alexellis.io/containers-on-swarm/
'''
cmd = ['jaas', 'run'] \
+ ['--command', container_command] \
+ ['--image', container_image] \
+ ['--mount', container_mount] \
+ ['--timeout', '86400s']
completed_process = subprocess.run(
cmd,
stderr=subprocess.DEVNULL,
stdout=subprocess.DEVNULL
)
self.available_cpus += job['requested_cpus']
self.available_memory += job['requested_memory']
if (completed_process.returncode == 0):
job['status'] = 'finished'
else:
job['status'] = 'failed'
# TODO: Push job changes to the database
return

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@ -9,4 +9,16 @@
</div> </div>
</div> </div>
</div> </div>
<div class="col s12">
<div class="card large">
<div class="card-content">
<span class="card-title">Swarm</span>
<form method="POST">
{{ swarm_form.hidden_tag() }}
{{ swarm_form.submit(class='btn') }}
</form>
</div>
</div>
</div>
{% endblock %} {% endblock %}

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@ -1,3 +1,4 @@
docker==4.0.2
Flask==1.0.3 Flask==1.0.3
Flask-APScheduler==1.11.0 Flask-APScheduler==1.11.0
Flask-Login==0.4.1 Flask-Login==0.4.1