This software implements a parallelized pipeline to setup image files. It is used for nopaque's File setup service but you can also use it standalone, for that purpose a convenient wrapper script is provided.
## Software used in this pipeline implementation
- Official Debian Docker image (buster-slim) and programs from its free repositories: https://hub.docker.com/_/debian
## Use this image
1. Create input and output directories for the pipeline.
2. Place your images files inside a directory in `/<my_data_location>/input`.
3. Start the pipeline process. Check the pipeline help (`file-setup --help`) for more details.
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# Option one: Use the wrapper script
## Install the wrapper script (only on first run). Get it from https://gitlab.ub.uni-bielefeld.de/sfb1288inf/file-setup/-/raw/1.0.0/wrapper/file-setup, make it executeable and add it to your ${PATH}